PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G217600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 352aa    MW: 39645.5 Da    PI: 8.7239
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G217600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.5e-09184231455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++ +L+ l+P +    +k   Ka +L + ++Y++sLq
  Aqcoe3G217600.1.p 184 SHSLAERVRREKISERMKQLQGLVPGC----DKVTGKALMLDEIINYVQSLQ 231
                        8*************************9....555*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.70E-8178231No hitNo description
SuperFamilySSF474599.03E-17178247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-16180244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.713180230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-6184231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-8186236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MAAFSYQHST SLLDSVLLPN INKMSSTSLE DGDINTCFSS YPPPQVLLHD VVKHQENRCL  60
YNNNNNNNSY NTLIKNISSE PLVIKKSKTD SSSMVIELDS DDQKDTSVEK KRKNKDGSCL  120
SSAQSQDMSG VKTKKQKKCN NTKKDDQTGE KKSKTVKKDQ KKILEEPPTG YIHVRARRGQ  180
ATDSHSLAER VRREKISERM KQLQGLVPGC DKVTGKALML DEIINYVQSL QYQVEFLSMK  240
LASVNPVQHD FGADLSSFMI KSEKGSLGSA FASMHQSNLT QPMTYSDTTT TLTTKSNYFH  300
QDNVVFFQQQ QGQMLTAFSQ PQDNADLLWD VYDQRQRALN QYGFNNLCSF Q*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3918262e-78FQ391826.1 Vitis vinifera clone SS0AFA9YF22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209284.11e-104hypothetical protein PRUPE_ppa008085mg
TrEMBLM5WMI51e-103M5WMI5_PRUPE; Uncharacterized protein
STRINGVIT_17s0000g00430.t015e-99(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.24e-56bHLH family protein